alabamagan

NIfTI-gridview

A pyQt interface to visualize NIfTI images as grided images.

mri_normalization_tools

Majority of the clinically used MRI sequences are not quantitative and this repo aims to provide a reproducible way to normalize MRI.

WristBoneSegmentation

Fully Automated Segmentation of Wrist Bone on T2-weighted fat-suppressed MR Images in Early Rheumatoid Arthritis

EROS

Extraction of Robust Orientation by Symmetry (S. Smith et al., 1998)

mri_radiomics_toolkit

alabamagan.github.io

BinomialProcessExample

This is a simulation of binomial stochastic process.

deep_learning_projects

DeeplearningReconstruction

DICOMTagViewer

Load DICOM files and show all readable tags

faster-rcnn.pytorch

A faster pytorch implementation of faster r-cnn

gpuview

A lightweight web dashboard for monitoring GPU usage

kaplanmeier

Create survival curves using kaplan-meier, the log-rank test.

maxillary_sinus_diagnosis_toolkit

Nyul

occiput

Tomographic vision

py_2d_filter_banks

Python-code-lab

pytorch-playground

Base pretrained models and datasets in pytorch (MNIST, SVHN, CIFAR10, CIFAR100, STL10, AlexNet, VGG16, VGG19, ResNet, Inception, SqueezeNet)

qtdcm

QtDcm provides a set of Qt widgets to search and query DICOM images from a PACS. https://qtdcm.github.io

QuoteFetcher

Python 2.7 based tool for grabbing qutoes from online community data tables

RENT

Feature selection method based on repeated elastic net.

simplewrap

Simple wrapper for C code based on ctypes

StochasticCTReconstruction

surface-distance

Library to compute surface distance based performance metrics for segmentation tasks.

survival_study

tomopy

Tomographic Reconstruction in Python

torchio

This forks the original repo to add some functions that is need by another repo. Including some improvements and workaround to accessing the internal mechanism and a linear rescale augmentor

ViT-V-Net_for_3D_Image_Registration_Pytorch

Vision Transformer for 3D medical image registration (Pytorch).

vmtk

the Vascular Modeling Toolkit