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afaruqi-corebiome

afaruqi-corebiome

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MMseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

Language:CLicense:GPL-3.0Stargazers:1318Issues:0Issues:0

MLRepo

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MetaPhinder

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virmap

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SqueezeMeta

A complete pipeline for metagenomic analysis

Language:CLicense:GPL-3.0Stargazers:348Issues:0Issues:0

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

Language:C++License:GPL-3.0Stargazers:573Issues:0Issues:0

COCACOLA

COCACOLA: a general framework for binning contigs in metagenomic studies incorporating read COverage, CorrelAtion, sequence COmposition and paired-end read LinkAge

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idba

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SolidBin

A genome binning method for contig binning, based on semi-supervised spectral clustering method.

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portal_client

Python-based client for downloading data made available through portals powered by the GDC-based portal system..

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