Austin's repositories

structure_factor

A module for computing static and dynamic structure factor from a GSD simulation script.

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active_matter_ML

Machine learning phase behavior for motility induced phase separation in active systems.

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ARENA_2.0

Resources for skilling up in AI alignment research engineering. Covers basics of deep learning, mechanistic interpretability, and RL.

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bootcamp

Caltech Introduction to Programming for the Biological Science Bootcamp

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gtc2017-numba

Numba tutorial for GTC 2017 conference

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hoomd-blue

HOOMD-blue is a general-purpose particle simulation toolkit. It scales from a single CPU core to thousands of GPUs.

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na-utils

Bootcamp utilities for parsing nucleic acid sequences.

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onedrive

OneDrive Client for Linux

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qmk_firmware

Open-source keyboard firmware for Atmel AVR and Arm USB families

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resume

resume

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swSim

Solid Wave Simulation (swSim) is software that solves heterogeneous, anisotropic elastodynamic equations for ultrasonic NDE simulation. A time-explicit staggered grid finite difference (FD) scheme is employed and solved on graphics processing units (GPUs). Parallelism via the Message Passing Interface (MPI) allows for deployment on a cluster, or on a single computer with one or more GPUs. Wavefield data is output using Visualization Toolkit (VTK) file formats for 3D rendering capabilities via open source tools, and a kernel composition module allows high-level registration of sequences of matrix operations, providing extensibility in equations and physics solved.

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ThinkDSP

Think DSP: Digital Signal Processing in Python, by Allen B. Downey.

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