adeshpande

followers

following

stars

Cambridge, MA

Aniket's repositories

nosql

NoSQL scripts for Bioinformatics

Language:Python2 20

Basset

Convolutional neural network analysis for predicting DNA sequence activity.

Language:Jupyter NotebookMIT020

bcbio-nextgen

Best-practice pipelines for fully automated high throughput sequencing analysis

Language:PythonMIT020

biopython

Official git repository for Biopython (converted from CVS)

Language:PythonNOASSERTION020

bss

Language:CSS020

chromozoom

ChromoZoom is a fast, fluid web-based genome browser

Language:CAGPL-3.0020

Cousera

Cousera Files

Language:Python020

DataScience

Collection of Data Science projects

Language:Jupyter Notebook020

deeplift

Public facing deeplift repo

Language:Python020

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Language:PythonBSD-3-Clause020

dev-challenge

The 10-day challenge for the Dev RampUp

Language:Python020

htslib

C library for high-throughput sequencing data formats

Language:CNOASSERTION020

parallel

Python scripts for multiprocessing and parallel execution

020

Probabilistic-Programming-and-Bayesian-Methods-for-Hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Language:Jupyter NotebookMIT020

pybiosys

Collection of Python scripts in bioinformatics and beyond

Language:Python000

rtg-tools

RTG Tools: Utilities for accurate VCF comparison and manipulation

Language:JavaNOASSERTION020