Alexandre Defelicibus's repositories
2pg-galaxy-tools
A package of Galaxy tools developed to run the 2PG Framework on the Galaxy.
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2017
bioconda-recipes
Conda recipes for the bioconda channel.
code2flow
Turn your Python and Javascript code into DOT flowcharts
Dictionaries
Hunspell UTF8 dictionaries. These work with Sublime Text. [Spell check]
django-municipios
Aplicação plugável Django com modelos e widgets para os Municípios Brasileiros
docker-galaxy-stable
:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.
docker-pulsar
A simple installation of Galaxy Pulsar using Docker
fastqc-report
Create a report of a run from Miseq and Nextseq Illumina sequencers
flot
Attractive JavaScript charts for jQuery
Fred2
Python-based framework for computational immunomics
galaxy-cefap
Galaxy instance of CEFAP-USP based on bgruening/docker-galaxy-stable
hla-polysolver
WIP: Fork of the Polysolver project
isb_course_2020
Materials and tutorials for the 2020 ISB Microbiome Course
koala-server
Koala - A web-based platform for protein structure prediction and analysis
myjsonserver
Test of JSON server
planemo
Command-line utilities to assist in developing tools for the Galaxy project.
pulsar
Distributed job execution application built for Galaxy
pulsar-cefap
Pulsar instance of CEFAP-USP
pVAC-Seq
A cancer immunotherapy pipeline
PyHighcharts
Python Highcharts Interface
tdd-course-coursera
Hands-on code from TDD course on Coursera
woland
WOLAND is a multiplatform tool to analyze point mutation patterns using resequencing data from any organism or cell. It is implemented as a Perl and R tool using as inputs filtered unannotated or annotated SNV lists, combined with its correspondent genome sequences.
woland-galaxy
Galaxy tool implementation of Woland