globodechicle (acontrerasg)

acontrerasg

Geek Repo

Location:EEP - CNRS - Lille

Twitter:@aconga7

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globodechicle's repositories

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denovoTE-eval

Supporting repository for article "Software Evaluation for 'de novo' Detection of Transposons"

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EDTA

Extensive de-novo TE Annotator

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emojicode

😀😜🔂 World’s only programming language that’s bursting with emojis

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Helitron

TE annotation pipeline Helitron Scanner

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Insect_REs

Scripts and data files used to study repetitive elements across insects in "The repetitive element landscape of insects"

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moiR

Useful R functions for an easier life and analyses

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popTAP

This repository contains a custom pipeline used to asses transposon absence polymorphisms (TAP) using short read illumina data.

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pafr

Read, manipulate and visualize 'Pairwise mApping Format' data in R

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RepeatMasker

RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

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scripts

Scripts for analysis used during the course

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SVs_in_1301_A.thaliana_lines

Structural Variation Calling Pipeline with NGS Data

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