Abuzar Mahmood's repositories
NeuronCluster
Python GUI to manually cluster spike waveforms
multicam_recording
Code for recording from multiple webcams at the same time
blech_pipeline
Python package for extraction, spike clustering and processing of Intan recorded neural data for Katz Lab
imutils_video
Edits to imutils
imutils
A series of convenience functions to make basic image processing operations such as translation, rotation, resizing, skeletonization, and displaying Matplotlib images easier with OpenCV and Python.
PyHMM
MAP or MLE estimation of HMMs using EM
prob_ML
Probabilistic machine learning code
svae
code for Structured Variational Autoencoders
bayesian_final_project
Backing up is nice :)
Multicore-TSNE
Parallel t-SNE implementation with MATLAB wrappers. The point of this fork is on making sure installation on macOS is easy
katz_lab_rotation
hmm code and analysis
courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
Scripts
Random scripts for image analysis in R and ImageJ. Good times :D