Giters
abelson-lab
/
scATOMIC
Pan-Cancer Single Cell Classifier
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Stargazers:
61
Watchers:
3
Issues:
31
Forks:
4
abelson-lab/scATOMIC Issues
Train Core scATOMIC hierarchy with my own data?
Updated
3 months ago
Comments count
1
scATOMIC can be used to annotate other species?
Closed
4 months ago
Comments count
1
known_cancer_type paramter possible value?
Updated
4 months ago
Comments count
1
Using scATOMIC on Metastatic Samples
Updated
5 months ago
Comments count
3
Problem too large
Updated
6 months ago
Comments count
1
Question about "known_cancer_type"
Closed
7 months ago
Comments count
2
pymagic_is_available() exit false
Closed
9 months ago
Comments count
2
Where are the individual prediction scores?
Closed
9 months ago
Comments count
5
overestimation of cancer cells?
Closed
9 months ago
Comments count
1
Mouse tumors?
Closed
9 months ago
Comments count
1
how to accelarate the annotation of large number (more than 1 million) of cells?
Closed
9 months ago
Comments count
1
Normal tissue cell in known cancer type
Closed
9 months ago
Comments count
1
Would like to make a suggestion, can the functions in the R package be imported by default?
Closed
9 months ago
Comments count
1
Error in filtered_counts[, 1]: incorrect number of dimensions
Closed
10 months ago
Comments count
4
invalid class “Graph” object: superclass "mMatrix" not defined in the environment of the object's class
Closed
a year ago
Comments count
5
CNV mode bug
Closed
a year ago
Comments count
19
CNV model
Closed
a year ago
Problems about the feature selection
Closed
a year ago
Comments count
2
Matrix package version / CNV mode issue
Closed
a year ago
Comments count
2
Run the example file and get error
Closed
a year ago
Comments count
6
Missing statement in create_summary_matrix
Closed
a year ago
Comments count
1
undefined columns selected
Closed
a year ago
Comments count
3
Running scATOMIC on known cancer type samples
Closed
a year ago
Comments count
9
"arguments imply differing number of rows" error - run_scATOMIC function call
Closed
a year ago
Comments count
6
Error in xtfrm.data.frame(x) : cannot xtfrm data frames
Closed
a year ago
Comments count
3
cell_predictions problem
Closed
a year ago
Comments count
8
Usage of tool for mouse models
Closed
2 years ago
Comments count
3
Input matrix contains unexpressed genes.
Closed
2 years ago
Comments count
17
Error run_scATOMIC
Closed
2 years ago
Comments count
8
Error of run_scATOMIC(lung_cancer_demo_data)
Closed
2 years ago
Comments count
4
Issue and solution with devtools::install_github("abelson-lab/scATOMIC")
Closed
2 years ago
Comments count
1