abakirbas

loadrs

expowo

Data Mining of Plant Diversity and Distribution for R

datadrivencv

R package for building customizable CVs from spreadsheets

Dirty30List-ShinyDashboard

Shiny Dashboard to track and visualize my climbing progress

db-dashboard

Project files of the article featured here: http://db.rstudio.com/best-practices/dashboards/

data-visualization-portfolio

Data visualization project repository.

automated-quarto-dashboards-slides

Slide deck for "Automate your reporting with Quarto Dashboards and Posit Connect"

2024-07-18_quarto-dashboards

2024-07-18 R-Ladies Rome Quarto Dashboards

assemblyqc

A Nextflow pipeline for evaluating assembly quality

PhyloAcc-C

Comparative-Annotation-Toolkit

cactus

Official home of genome aligner based upon notion of Cactus graphs

hal

Hierarchical Alignment Format

segui

A GUI version of the SEGUL phylogenomic tool

segul

An ultrafast and memory efficient tool for phylogenomics

transXpress

transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation

phylochemistry

R code phylochemistry

transXpressLite

transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation

phylochemical_mapping

tidyomics

Easily install and load packages from the tidyomcis ecosystem

plyranges

A grammar of genomic data transformation

tidyomicsBlog

the manifesto, workshops and tutorials of the tidy transcriptomics

tidySpatialWorkshop2024

Tidy genomic and transcriptomic analyses

tidy-intro-talk

Intro talk for tidyomics project

analysis_guides

10x Genomics analysis guides files

loupeR

Convert Seurat objects to 10x Genomics Loupe files.

tutorials

GenomeSkim_paper

RandomCode

skim2mito

A snakemake pipeline for the batch assembly, annotation, and phylogenetic analysis of mitochondrial genomes from genome skims

genome_skimming_LAB

A set of scripts to analyze Illumina sequencing data to find whole mitochondrial genomes using Smithsonian's Hydra HPC