Aarthi Ravikrishnan's repositories
metquest-1
Enumerating biosynthetic pathways in metabolic networks
gutmicrobiome
Contains all the codes and the files required to generate the images in the paper titled "Unraveling microbial interactions in the gut microbiome"
aarthi31.github.io
Aarthi Ravikrishnan's website
balance
An R package to visualize balances of compositional data without dendrograms
bioconvert
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
BubbleCV
This is a professional CV template inspired by the legendary secret agent James Bond. BubbleCV is designed to effectively showcase your skills, work experience, education, and contact information in a sleek and impactful manner.
caret
caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
CODAinPractice
Compositional Data Analysis in Practice
FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
gneiss
compositional data analysis toolbox
Groningen-Microbiome
Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groningen
Introduction_to_R
This repository contains the documentation, background material, scripts, and data for a tutorial on the Introduction to R. This introductory workshop is greared towards people with a interest/ background in geography and environmental science.
Jenior_RIPTiDe_2020
Repository associated with RIPTiDe publication
MAGBinning
Another MAG binning pipeline
MetaErgInstallHelper
A few scripts to help with the installation of MetaErg, the contig/bin annotation pipeline
metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
panchangam
Computing the Indian calendar/panchangam and festivals using Swiss ephemeris
Shotgun-Metagenomics-Analysis
Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more
tensorflow
An Open Source Machine Learning Framework for Everyone
Topcuoglu_ML_mBio_2020
Best practices for applying machine learning to bacterial 16S rRNA gene sequencing data
training-collection
Collection of bioinformatics training materials