Aaron's repositories
debian-builds
Contains patches and other files for the Debian packaging process of various software
GSVA
Gene set variation analysis for microarray and RNA-seq data
influenza-pb2
Analysis of influenza PB2 protein interactions
json-stream
A streaming JSON parser that generates SAX-like events.
jsonpath-stream
Low memory parsing of JSON with the JSONPath language
nf-hackathon-2019
Guided data tour for the 2019 NF Hackathon
nf-mf
Tools for matrix factorization methods for NF
OmicsIntegrator
This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a network context.
pkgbuilds
Arch Linux PKGBUILDs for the AUR
pyNBS
Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)
sandbox-infra
Automation for the Sage AWS org-sagebase-sandbox account
sandbox-provisioner
An service to auto provision resources on AWS scicomp