aTrotier / BartIO.jl

BartIO.jl

BartIO.jl is a Julia package in order to interact with the Berkeley Advanced Reconstruction Toolbox (BART).

This package offers the possibility to :

• read and write cfl/hdr files used by the BART Toolbox
• Call BART command (required to install the BART toolbox

IO to BART

To load BART data (stored in a .cfl and a .hdr header file), simply call readcfl(filename), where filename can be either be without a filename extension, or it can include .cfl or .hdr.

To write BART compatible files, call writecfl(filename, x), where filename can be either be without a filename extension, or it can include .cfl or .hdr.

Calling function from BART

Requirements

• The BART toolbox need to be compiled.

Usage

bart = wrapper_bart(path2bartFolder)
bart(0,"version")
k_phan = bart(0,"phantom -x64 -k")

If you need help for the function you can either use :

bart(0,"pics -h")