Alastair's repositories
sea-snake-selection
Scripts relating to the analysis of Hydrophis snakes and their terrestrial-to-marine transition.
snakes-demographic-history
Code used for demographic history analysis. PSMC and downstream processing
nf-pipelines
Pipelines used in my PhD/day-to-day
sample-management
Simple scripts and Shiny application for building a sample database and interacting with it.
snakes-selection
Terrestrial-marine selection analysis in Aipysurus laevis
a-lud.github.io
Have a look
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dart-analyses
DaRT processing scripts
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eteTools
A helper tool for wrangling output from CodeML via ETE3 evol
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gene_capture
Simple pipeline for gene capture 'assembly' using a close reference
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nf-modules
Repository of modules used by nf-pipelines
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nf-workflows
Workflows used by nf-pipelines
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spectroPlotting
Plotting script for spectro data
hydrophis-genome-scans
Code and data relating to genome scans of three hydrophis species
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Thesis
Documents relating to the submission of my PhD thesis
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