Ziyao Li's repositories
AlphaFold3
To become an implementation of AlphaFold3 based on Uni-Fold.
molgan-without-mode-collapse
MolGAN without Mode Collapse
pku-optim-method
Peking University - Optimization Method - Gao, Li - Spring, 2018
BroCParser
Rule based semantic parser of geo880.
ControlNet
Let us control diffusion models!
deepmd-kit
A deep learning package for many-body potential energy representation and molecular dynamics
diffab
✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
gvp-pytorch
Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure
Hearthstone-Deck-Tracker
A deck tracker and deck manager for Hearthstone on Windows
LoRA
Code for loralib, an implementation of "LoRA: Low-Rank Adaptation of Large Language Models"
MongeAmpereFlow
Continuous-time gradient flow for generative modeling and variational inference
PiFold
The official implementation of the ICLR'2023 paper PiFold: Toward effective and efficient protein inverse folding.
ProteinMPNN
Code for the ProteinMPNN paper
RoseTTAFold
This package contains deep learning models and related scripts for RoseTTAFold