ZheFrench / MicroArrayAnalysis

Script used to normalise Gene Arrays Affymetrix 2.1 ST and execute a differential expression Analysis

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MicroArrayAnalysis

Arrays CEL files were processed using R version 3.6.

They were preprocessed by Robust Multiarray Average (RMA) from the Oligo R Package version 1.48.0. The package Limma version 3.40.6 was used to identify genes differentially expressed filtered by a p-value of 0.05 and a fold change of 1.1. Both paired and unpaired analysis were executed.

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Script used to normalise Gene Arrays Affymetrix 2.1 ST and execute a differential expression Analysis


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