YushiFT

Yushi Tang's starred repositories

Imputation of parental genotypes, inference of sibling IBD segments, family based GWAS, and polygenic score analyses.

Language:PythonMIT2400

Scalable population structure inference

Language:C++MIT1700

Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)

Language:RGPL-2.06700

A framework for managing and maintaining multi-language pre-commit hooks.

Language:PythonMIT1289100

In class

Language:PythonBSD-3-Clause200

A collection of useful .gitignore templates

CC0-1.016215000

Mini-course at Princeton on High Performance Python

Language:Jupyter Notebook7000

Markdown Cheatsheet for Github Readme.md

MIT500200

Language:ShellNOASSERTION1800

R Markdown: The Definitive Guide (published by Chapman & Hall/CRC in July 2018)

Language:RMarkdownNOASSERTION78100

Language:Python1800

Two locus likelihoods and ARGs under changing population size

Language:PythonMIT1200

Fast inference of fine-scale recombination rates based on fused-LASSO

Language:PythonMIT4300

An R package for performing STAAR procedure in whole-genome sequencing studies

Language:C++GPL-3.09000