Lijian11's repositories
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
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CellphoneDB
CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
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dataviz
A book covering the fundamentals of data visualization
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multinichenetr
MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
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NetBID
Data-driven Network-based Bayesian Inference of Drivers
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
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SJARACNe
Scalable Tool for Gene Network Reverse Engineering
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