YanyiPU / paperpile-notion

Integrating Paperpile with Notion Databases 🔄

Paperpile Notion Integration

This repository provides a simple integration between Paperpile and Notion using the new Notion API. The purpose is to make it easy to periodically sync a list of papers in Paperpile to a Notion database.

This is a work in progress, and is currently intended for personal use only (no support, no warranty, no liability, etc.).

New: The WIP script download_paperpile_folder.py provides an automated way to download a folder from a Paperpile account. This script uses Chromium and Selenium, so the chrome drivers must be placed under the path to make it work. Check the args for more information.

Installation

Simply clone the repo locally and install the dependencies, preferably in a virtualenv:

git clone https://github.com/gsarti/paperpile-notion.git
cd paperpile-notion
python3 -m venv venv
pip install --upgrade pip
pip install -r requirements.txt

Requirements

To run the script, you will need the following things:

1. A CSV file exported from Paperpile containing the list of papers and their metadata. data.csv is an example of an exported CSV. For now, this needs to be manually downloaded and moved to this folder since Paperpile does not provide any API for exporting data.

2. A configuration file to map categories, journals and conferences to their acronyms. config.yaml is an example of a configuration file containing major AI and NLP conferences and journals.

3. A database id for the Notion database you want to sync to. To retrieve the database id, follow the directions provided here. The current structure for the database must contain at least the following columns:

   • Item type ( select ): Corresponds to the Item type field in the Paperpile export (e.g. Conference Paper, Journal Article, etc.).

   • Title ( title ): The title of the paper.

   • Status ( select ): Set to Done when the paper was read, empty otherwise. Can take other values. Managed by using a "Read" and a "To Read" folder inside Papepile.

   • Authors ( multi_select ): The paper's authors. Corresponds to the Authors field in the Paperpile export, with only lastnames and first letter of firstnames.

   • Venues ( multi_select ): The venues in which the paper was published. Based on the config sections for mapping names to acronyms. Multiselect to specify e.g. conference + arXiv.

   • Date ( date ): The date the paper was published.

   • Link ( url ): Link to the paper. If multiple links are available, arXiv links are preferred.

   • Categories ( multi_select ): The categories the paper belongs to. Define the macro-fields to which the paper belongs. These are extracted from the labels that were assigned to the paper on Paperpile.

   • Methods ( multi_select ): The methods and aspects investigated in the paper. Can be whatever, from architectures (e.g. CNN, Transformer) to sub-topics. On Paperpile, these correspond to labels having the following format: category_shortname - method_name (e.g. Probing tasks for interpretability research could be INT - Probing). Refer to the CSV file for an example.

4. A Notion API key. To retrieve the API key, follow the directions provided in the Notion API Getting Started. You will also need to add permission for the integration on the database from the previous point.

Usage

Once everything is in place, simply run the script as:

python update_notion_db.py \
    --input data.csv \
    --config config.yaml \
    --database <YOUR_DB_ID> \
    --token <YOUR_NOTION_API_KEY>

The experimental script to auto-download a folder from Paperpile can be run as:

python download_paperpile_dir.py \
    --username <YOUR_GOOGLE_USERNAME> \
    --password <YOUR_GOOGLE_PASSWORD> \
    --folder_id <YOUR_FOLDER_ID> # e.g. pp-folder-2cb1833f-582f-0000-ad59-567be5718692

This will download the folder content in CSV format in the default download location.

Example output, adding a new paper to the database:

Example resulting database on Notion: