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TOM YAN (YTLogos)

YTLogos

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Company:Hunan Agricultural University, China

Location:Changsha,China

Home Page:https://taoyan.netlify.app

Twitter:@TaoYANLogos

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TOM YAN's starred repositories

ggside

ggplot2 extension allowing for plotting various geometries as side panels using the ggplot2 API

Language:RLicense:NOASSERTIONStargazers:325Issues:0Issues:0

grosling

R interface to 'Gos'

Language:RLicense:MITStargazers:34Issues:0Issues:0

jjAnno

An annotation package for ggplot plot

Language:RLicense:NOASSERTIONStargazers:104Issues:0Issues:0

ggdatasaver

Automatically save data associated with a 'ggplot2' plot

Language:RLicense:NOASSERTIONStargazers:23Issues:0Issues:0

gtExtras

A Collection of Helper Functions for the gt Package.

Language:RLicense:NOASSERTIONStargazers:183Issues:0Issues:0

loopurrr

Translate purrr functions into regular for loops

Language:RLicense:NOASSERTIONStargazers:81Issues:0Issues:0

KAT

The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

Language:C++License:GPL-3.0Stargazers:200Issues:0Issues:0

TGG

tomato graph pangenome

Language:PythonLicense:MITStargazers:68Issues:0Issues:0

photopea

Photopea is online image editor

Stargazers:7134Issues:0Issues:0

joyful-pandas

Pandas中文教程

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ML-For-Beginners

12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all

Language:HTMLLicense:MITStargazers:67849Issues:0Issues:0

methylKit

R package for DNA methylation analysis

Language:RStargazers:193Issues:0Issues:0

CHM13

The complete sequence of a human genome

License:NOASSERTIONStargazers:878Issues:0Issues:0

muscle

Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

Language:C++License:GPL-3.0Stargazers:173Issues:0Issues:0

AnnoSINE

SINE annotation tool for plant genomes

Language:PythonLicense:MITStargazers:18Issues:0Issues:0

ITIPs

Identification of transposable element insertion polymorphisms (TIPs) based on a pan-genome and large-scale resequencing data

Language:PerlStargazers:13Issues:0Issues:0

GameteBinning_tetraploid

This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings

Language:C++License:MITStargazers:11Issues:0Issues:0

plotsr

Tool to plot synteny and structural rearrangements between genomes

Language:PythonLicense:MITStargazers:267Issues:0Issues:0

TransposonUltimate

TransposonUltimate - a holistic set of tools for transposon identification

License:GPL-3.0Stargazers:73Issues:0Issues:0

cols4all

Colors for all (R package)

Language:RStargazers:295Issues:0Issues:0

CV

My curriculum vitae.

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rna-seq-lesson

A Carpentries-style lesson on RNA-Sequencing

Language:HTMLLicense:NOASSERTIONStargazers:15Issues:0Issues:0

ggplot2

ggplot2 plotting related files

Stargazers:55Issues:0Issues:0

bed-reader

A library for easy, fast, and efficient reading & writing of PLINK Bed files

Language:RustLicense:Apache-2.0Stargazers:69Issues:0Issues:0

MYB_annotator

This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new transcriptome of genome assemblies.

Language:PythonLicense:GPL-3.0Stargazers:16Issues:0Issues:0

Ks_plots

R functions for Ks plot analyses with mixture models

Language:RLicense:GPL-3.0Stargazers:3Issues:0Issues:0

r4ds

R for data science: a book

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BookChapter-RNA-Seq-Analyses

Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis

Language:ShellLicense:GPL-3.0Stargazers:37Issues:0Issues:0

bcftools

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

Language:CLicense:NOASSERTIONStargazers:630Issues:0Issues:0

optout

Optimized Graphics Output

Language:RLicense:MITStargazers:15Issues:0Issues:0