The Jupyter Notebook in this repository contains analysis and visualization code of transcript quantification data that are publicly available on GTEx Portal.
I followed a similar analysis and visualization procedure implemented in Glinos et al. paper [1]. I also used the supplemental information and tables provided in their publication.
Transcript quantification was done through the Flair.
References:
[1] Glinos, D.A., Garborcauskas, G., Hoffman, P. et al. Transcriptome variation in human tissues revealed by long-read sequencing. Nature 608, 353–359 (2022). https://doi.org/10.1038/s41586-022-05035-y.