YAndrewL

CLAPE

contrastive learning and pre-trained encoder for protein-ligand binding sites prediction

Quiclick-RNA-seq

A python package for RNA-seq data analysis, based on python and SPRINT software.

cpb-final

Computational biology final project in THU.

pth_masif

A PyTorch based implementation of masif

Conditional-antibody-generation

Antibody generation

Graphormer

This is the official implementation for "Do Transformers Really Perform Bad for Graph Representation?".

Guideline-for-Computational-Biology-and-Bioinformatics

masif_pytorch

Protein-peptide

pytorch-lightning-template

An easy/swift-to-adapt PyTorch-Lighting template. 套壳模板，简单易用，稍改原来Pytorch代码，即可适配Lightning。You can translate your previous Pytorch code much easier using this template, and keep your freedom to edit all the functions as well. Big-project-friendly as well.

pytorch_HAN

Heterogeneous Graph Attention Network (HAN) with pytorch

research-method

论文写作与资料分享

scripts

Several scripts I used in lab working.

Small_molecules

CLAPE-like repo for ligand-binding sites prediction