XiangBu's repositories
altair
Declarative statistical visualization library for Python
cola
A General Framework for Consensus Partitioning
CommonDataModel
Definition and DDLs for the OMOP Common Data Model (CDM)
covid_macrophages_integration
scRNA-seq data integration from "SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis".
DeepAccNet
Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
DeepCAC
Fully automatic coronary calcium risk assessment using Deep Learning.
Discharge-Prediction_eICU-CRD
This repository presents the implementation of different machine learning architectures to determine the efficacy of the Acute Physiology andChronic Health Evaluation (APACHE) IV score as well as the patient characteristics that comprise it to predict the discharge destination for critically ill patients within 24 hours of ICU admission.
eICU-GNN-LSTM
This repository contains the code used for Predicting Patient Outcomes with Graph Representation Learning (https://arxiv.org/abs/2101.03940).
interpretable-ml-book
Book about interpretable machine learning
KDRI
Eliminating the use of race in kidney graft failure risk prediction.
Machine-Learning-for-Healthcare-Analytics-Projects
Published by Packt
mit-deep-learning-book-pdf
MIT Deep Learning Book in PDF format (complete and parts) by Ian Goodfellow, Yoshua Bengio and Aaron Courville
PIC_mortality
Predicting In-hospital Mortality of Patients in the Pediatric ICU
pnet_prostate_paper
P-NET, Biologically informed deep neural network for prostate cancer classification and discovery
pycaret
An open-source, low-code machine learning library in Python
RA_plasma_metabolomics_2021
Scripts for generating results in Hur et al. "Plasma Metabolomic Profiling in Patients with Rheumatoid Arthritis Identifies Biochemical Features Predictive of Quantitative Disease Activity". Arthritis Research & Therapy, 2021. https://doi.org/10.1186/s13075-021-02537-4
shockalert-documented
Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU
snippet
just some code snippet
stacking_and_explaining
Creating stacked models and explaining single instances with Shap values
TensorFlow-Examples
TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)