The standard data analysis of 16S and MGS data by XMAS 2.0. The upstream process is performed by in-house pipeline. and this example just shows how to perform downstream data analysis. In briefly, the example comprises the following steps:
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Converting inputs into phyloseq object;
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Quality Evaluation;
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Pre-Processing Data;
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Diversity analysis;
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Ordination analysis;
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Composition analysis;
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Differential analysis;
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Network analysis.
Xbiome company
- Submitted to gitlab. (2022-05-28)
- Uploaded bookdwon. (2022-08-04)
- Added Chapter Network Analysis . (2022-08-04)
- Updated bookdwon by XMAS version 2.2.0. (2023-10-27)