XRCHAM / tpm_rpkm

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tpm_rpkm.R

Simple RScript to calculate RPKMs and TPMs from the counts created by featureCounts

RPKM/TPM calculations are based on the methods shown in http://www.rna-seqblog.com/rpkm-fpkm-and-tpm-clearly-explained/

The input file is the output of featureCounts

Usage: Rscript tpm_rpkm.R <featureCounts_output_file>

Creates: <featureCounts_output_file>_rpkm.txt <featureCounts_output_file>_tpm.txt

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License:MIT License


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