WormLabCaltech

alaska

Automated and friendly RNA-seq analysis (deprecated)

mprsq

Massively Parallel RNA-seq Project

Angeles_Leighton_2016

dauerRNAseq

expression-plotter

Automated data analysis and plot generator.

cGAL

Everything cGAL, the GAL4-UAS system for C. elegans

clustering_on_transcript_compatibility_counts

Clustering cells from single cell RNA seq assays

DigiTracker_Suite

The Caltech Worm Tracker (Sternberg Lab)

med-cafe

A project to study a short allelic series of mediator mutants using transcriptomic phenotypes.

pycelegans-2.0

PyCelegans code and examples, generative statistical algorithm for complex postures

QuinteroSternberg2016

WormLabCaltech.github.io

Build a Jekyll blog in minutes, without touching the command line.

ctd_paper

GSATemplate

LaTeX templates for Genetics and G3 manuscripts, from Overleaf

PQpython_utils

pycelegans-1.0

Parallel image processing code that identifies C. elegans in images

ResidentWorm

Compares worm occupancy between different regions of interest.

RNA_seq_template

A template for non-single-worm RNA-seq projects