Wenfei-Xian

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Max planck insitute for Biology, Tuebingen

Tuebingen

Wenfei Xian's repositories

TIPP

Telomere local assembly, Improved whole genome polish, and Plastid assembly

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BLISTR

BLurry Imperfect Short Tandem Repeats

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FCSSR

Fast and Comprehensive Short Simple Repeat Finder

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bam-readcount_readsID

Count bases in BAM/CRAM files

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cgmonline

CGM 主站

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genoTR

A tool for genotyping tandem repeat

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gpn

Genomic Pre-trained Network

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Hu-etal-2019-data

Data, result, and simulation files from Hu et al. 2019

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kmerfreq

kmerfreq count K-mer (with size K) frequency from the input sequence data, typically sequencing reads data, and refe rence genome data is also applicable. Kmerferq output file can be used as input file of either version of GCE (Genomic character estimator).

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KmersFinder

Most Frequent K-mers Finder

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Mutation-accumulation-lines

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Strainline

Full-length de novo viral haplotype reconstruction from noisy long reads

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Strand-bias-of-SNP

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Oak_tree

High quality assembly and somatic mutation in Oak tree

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Pushing_the_limits_2

Pushing the limits of Pacbio HiFi data

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Reproducible_for_TIPP_paper

Reproducible_for_TIPP_paper

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seqtk

Toolkit for processing sequences in FASTA/Q formats

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TLA

Telomere local assembly

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