WackerO's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
mhcquant-1
Identify and quantify MHC eluted peptides from mass spectrometry raw data
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
multi-package-containers
Testing building mulled containers for multi-requirement tools.
nf-co.re
Code and files for the main nf-core website.
nf-validation
Params validation plugin for Nextflow pipelines
pipeline-docs
Docs for QBiC pipelines
rnadeseq
Differential gene expression analysis and pathway analysis of RNAseq data
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
shinyngs
Shiny apps for NGS etc based on reusable components created using Shiny modules
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
test-datasets
Test data to be used for automated testing with the nf-core pipelines