Wenhao's repositories
bayNormJL.jl
bayNorm in Julia.
BayesSpace
Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
Code_Request
General R functions and scripts for publications
conv_arithmetic
A technical report on convolution arithmetic in the context of deep learning
DataDive_scRNAseq_mapping
Imperial Medical Data Dive 2019: code for preparing multiple brain single cell RNA-seq for mapping against each other
dca
Deep count autoencoder for denoising scRNA-seq data
libpku
贵校课程资料民间整理
mapcloud
10X/SS2/spatial transcriptomics/genotyping internal cloud pipeline
One2One
This package is used to get 1:1 orthologs based on MGI homology data from http://www.informatics.jax.org/homology.shtml
pattern_prediction_NN_Shangying
Use LSTM neural network for 1D distributional data prediction
pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
SEQ_Tung2017
Learn how to do alignment using sequence datasets from Tung 2017
SPATAData
The database for spatially resolved transcriptomics
st_pipeline
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
TensorFlow-Course
Simple and ready-to-use tutorials for TensorFlow
tumourMassDormancy
This repository contains the code developed for the analysis of tumour mass dormancy, immunological and angiogenic dormancy across cancers from the Cancer Genome Atlas (TCGA).
VAMPIRE_open
open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition