WGLab / DeepRepeat

An accurate repeat detection from Nanopore data using deep learning and image techniques

WGLab/DeepRepeat Issues

Could you please let me know which version of DeepRepeat supports Guppy for basecalling？
Updated a year ago1
ONT Basecalling Update to Dorado and Pod5- What does this mean for DeepRepeat?
Updated a year ago1
Error in DeepRepeat installation
Updated a year ago
Issue on summary file and generating f5index
Updated a year ago3
Error in installation
Updated a year ago9
Cannot generate index file
Updated a year ago12
No sequencing summary file found using docker execution
Closed 2 years ago2
Seeking guidance on use of custom STR bed files
Closed 2 years ago2
Error in installing DeepRepeat
Updated 2 years ago49
Impossible to open/read FAST5 files
Updated 2 years ago7
Error on running on example data and data available to us
Closed 2 years ago12
[Suggestion] Adding optional long-read mapper
Updated 2 years ago2
Seeking guidance to use on GRCh38 genome
Updated 2 years ago5