WEHI Research Computing's repositories
FileSenderCli
Improved command line interface and Python API for interacting with FileSender servers
Genomics-Metadata-Multiplexing
Genomics Metadata Multiplexing Repository
CarpentriesSlides
Converts Carpentries workbench workshops to slides
EnvironmentModules
A user friendly R front-end for the Environment Modules system. Offers a way to load and unload system packages on shared HPC (High Performance Computing) environments, through R.
WEHI-ResearchComputing.github.io
This is the website for the RCP at WEHI
container-recipes
Container recipes created by the RCP team
bioconductor_maintenance
Repo to explore if bioconductor maintenance can be streamlined
cryo_em_grid_detection_ai
cryo-EM Grid Detection
DashAclEditor
Dash GUI for editing Posix file acess control lists (ACLs)
deepscatter-wehi-pubmed
Visualisation of WEHI's pubmed landscape data using github.com/nomic-ai/deepscater
docker-introduction
Reproducible Computational Environments using Containers
DynamicDet
[CVPR 2023] DynamicDet: A Unified Dynamic Architecture for Object Detection
EvoBind
Fork of original EvoBind for adaptation to WEHI's Milton HPC
lesson-R-packaging
R Packaging
nf-template
A nextflow template repository
Service_Workbench_Templates
Templates for AWS Service Workbench from Relevance Lab
student_intern_data_public
Public version
WEHI-Alphafold
Open source code for AlphaFold.
wehi-shell-novice
The Unix Shell
Workshop-intermediate-slurm
Intermedate Slurm Workshop source code using the Software Carpentry Workbench style.
Workshop-IntroToHPC-Slurm
RCP Training introducing HPC concepts and SLURM