Pacman 's repositories
galaxy-rna-workbench
Galaxy RNA workbench
bioconda-extended-base-image
An extended docker container for cases where the busybox image is too limited.
BOSS-RUNS
Dynamic, adaptive sampling during nanopore sequencing
chemprop
Message Passing Neural Networks for Molecule Property Prediction
covariants
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
emg-viral-pipeline
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
ensembl-variation
The Ensembl Variation Perl API and SQL schema
evSeq
Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
forgeinStrain
Bioinformatics program inStrain
MGOverDrivE
QOPT
OmicronspdbsB1.1.529
Omicronspdbs B1.1.529 K21 (L21sister clade) for further processing and re- dockings
periscope
A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.
PyRosetta.notebooks
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
RNAFramework
RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
SADDLE
matlab independent
template
A template for code examples on this account. See for details on contribution guidelines.
torchani
Accurate Neural Network Potential on PyTorch
totalviralrecall
Detection of NCLDV signatures in 'omic data
workspace-images
Ready to use docker images for Gitpod workspaces