Vincent Bouttier's repositories
A-multiscale-approach-to-psychedelics-based-on-the-circular-inference-framework_IMPLEMENTATION
Matlab code for the article “From hallucinations to synaesthesia: A circular inference account of unimodal and multimodal erroneous percepts in clinical and drug-induced psychosis”; Leptourgos P., Bouttier V., Denève S., Jardri R.; Neuroscience & Biobehavioral Reviews, 2022 - see link below
dynamical_CI_bistable
Matlab code for the article “A functional theory of bistable perception based on dynamical circular inference” (Leptourgos P., Bouttier V., Jardri R., and Denève S.; PLOS Computational Biology 2020) - see link below
neural_activity_Circular_BP
Python code to simulate neural activity based on the Circular Belief Propagation algorithm
overactivation_and_dysconnectivity_in_connectomes
Python code for the article “Circular inference predicts nonuniform overactivations and dysconnectivity in brain-wide connectomes”; Bouttier, Duttagupta, Denève, and Jardri; Schizophrenia Research 2021 - see link below
arviz
Exploratory analysis of Bayesian models with Python
interactive-tutorials
Interactive Tutorials
Projet-PGM
Class project - Probabilistic Graphical Models (Master MVA - ENS Cachan). Learning non-linear dynamical systems with the EM algorithm
smiles-transformer
Original implementation of the paper "SMILES Transformer: Pre-trained Molecular Fingerprint for Low Data Drug Discovery" by Shion Honda et al.
unet
unet for image segmentation
vbmc
Variational Bayesian Monte Carlo (VBMC) algorithm for posterior and model inference in MATLAB
xarray
N-D labeled arrays and datasets in Python