GeneWalker (VergaJU)

VergaJU

Geek Repo

Company:University of Galway

Location:Galway, Ireland

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GeneWalker's repositories

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BoneMarrow_scRNA-Seq

Collection of scripts, pipelines and files used to create a new dataset of scRNA-Seq data.

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Microarray

Container and scripts to analyse microarray data

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arcasHLA

Fast and accurate in silico inference of HLA genotypes from RNA-seq

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Cloud_CIX

Documentation for baby clouds

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Differential_expression

This is the part dedicated to the differential expression

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hla_tiping

Easy script to run HLA typing tools on a batch of BAM files

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Muscle_wasting

Mirna_Muscle_Waisting

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OnClass

OnClass repo to work with my datasets

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ScoreMarkers

Function to score the expression of positive and negative markers in single cell RNA seq data

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shapes

Workship material for Introduction to Software Thinking

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Test_DEG_methods-single_cell

Container and scripts to test different differential gene expression analysis methods

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