VariantEffect / hgvsParseR

An HGVS string parser for the R programming language

hgvsParseR

An R-package for parsing and building variant descriptor strings compliant with the HGVS standard. See http://varnomen.hgvs.org/ for more information on HGVS strings. For documentation see https://github.com/VariantEffect/hgvsParseR/blob/master/manual.pdf

Requires:

• R 3.1.2 or higher

Recommended:

• devtools
• testthat
• roxygen2

Installation:

1. Open command line terminal
2. If not already installed, install devtools install.packages("devtools")
3. Load devtools library("devtools")
4. Install hgvsParseR install_github("VariantEffect/hgvsParseR")

Usage:

See https://github.com/VariantEffect/hgvsParseR/blob/master/manual.pdf