VCG

upset

UpSet - Visualizing Intersecting Sets

compresso

Compresso: Efficient Compression of Segmentation Data For Connectomics

psc

Parallel Separable 3D Convolution for Video and Volumetric Data Understanding

vimo-sketches

A React component to sketch / search for network motifs.

cloudrun-demo

Tutorial to deploy client/server app in Google Cloud Run

guidedproofreading

Guided Proofreading of Automatic Segmentations for Connectomics

trust_in_science

vimo-server

vimo backend microservice

cave-scripts

Notebooks to interact with the CAVE infrastructure, hosted by the Lichtman Lab and VCG at Harvard.

newbie-wiki

VCG Newbie Wiki Page

parallel_unet

2D parallel arms of 3D unet for malis.

ProofreadingProgress

seeded_zwatershed

A seeded watershed using z-affinities to define the weights between connected components

em-quality-metric

Repo for Daniel's work on an EM quality metric

perception

alignment_and_padding

Barrio

A visual tool to compare and analyze nanoscale brain structures.

caffe

Caffe: a fast open framework for deep learning. With OpenCL and CUDA support.

CAVEdeployment

EMAnnotationSchemas

Repository to hold schemas for annotations of volumetric imaging data focused on EM

experiential_learning_vis

gp

Guided Proofreading of Automatic Segmentations in Connectomics

mlproof

New code for machine learning-based proofreading.

neuroglancer

WebGL-based viewer for volumetric data

neuroglancer-seunglab

WebGL-based viewer for volumetric data

ng-extend

openscholar_theme

PyChunkedGraph

Data backend for fast proofreading of cell segmentations in connectomics datasets

rallly

Self-hostable doodle poll alternative. Find the best date for a meeting with your colleagues or friends without the back and forth emails.

vis_design_sprints_tutorial_2023

Materials for the IEEE Vis 2023 Tutorial on "Visualization Design Sprints".