Victor Chang Cardiac Research Institute

Sierra

Discover differential transcript usage from polyA-captured single cell RNA-seq data

Ularcirc

An R-shiny app that provides backsplice and canonical splicing analysis for both circular RNA (circRNA) and parental transcripts

FlowGrid

VPOT

VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF files.

PBrowse

A real-time collaborative genome browser

Cardiac-Image-Analysis

Images, macros and analysis pipelines for the quantitative analysis of cardiac parameters from microscopy images

CAPS

CMmolecularSignatures

Cardiomyocyte molecular signatures

PGSCatalogCalculator

RNASeqWorkflows

VCCRI.github.io

azure-nextflow

automate azure batch deployment

azure-nextflow-cipa

cipa_master_training_docker

cipa_model_validation_docker

CompanyPortal

Company-Portal-Icon

DCM_polygenic_study_2024

A 2024 study on polygenic risk scores and familial inheritance of dilated cardiomyopathy

ecological_study_asbestos_ARD_2022

A 2022 ecological study of asbestos consumption and asbestos related diseases (ARD)

FibroblastIntegration

Code related to the integration analysis of cardiac fibroblasts

from_dels_to_retrogenes

Identify retrocopied genes from whole genome sequencing structural variant clean intron deletions

LAMA

Automatic phenotyping tool for 3D images

MetaDenovo

MetaDenovo : An automated framework to detect de novo mutations from whole genome trio data using cloud computing technology.

SCN5A_SyncroPatch

ShinyCell

Shiny Interactive Web Apps for Single-Cell Data

ShinyCell-Docker

Shiny Interactive Web Apps for Single-Cell Data

SpliceSM

sSNVs

TrioSim

variant_calling_and_annotation_pipeline

Scripts to call, annotate and analyse variants for multiple samples of whole genome sequencing (WGS)

vpv

Volumetric viewer