BioLockJ is an automated metagenomics pipeline for WGS/16s sequence analysis. The extensible Java framework writes/executes bash scripts to call external applications via BioModule interface. BioModules perform sequence processing, taxonomy assignment, univariate modelling, and report generation.
Please see the user guide for our latest stable version here:
https://biolockj-dev-team.github.io/BioLockJ/
You can also see the guide for the current development version, and previous stable versions here:
https://biolockj.readthedocs.io/en/latest/
JavaDocs for the project are available here
