USDA-VS

vSNP

vSNP -- validate SNPs

GenoFLU

Influenza data pipeline to automate genotyping assignment

NAHLN_AMR

vSNP3

vSNP -- validate SNPs

fastq_data_set-brucella

Brucella FASTQ test files

fastq_data_set-tb_complex

minimum_fastqs

testing files: smallest file size and still complete through vSNP_step1.py

vcf_test_files

A small set of VCFs with expected output tables for script testing

vsnp3_test_dataset

Dataset for testing vSNP version 3 installation

vSNP_archive

Archived versions of vSNP

vSNP_reference_options

vSNP supporting files

Flumina

A pipeline for the analysis of Illumina sequence data from Influenza viruses

nvsl_bioinformatic_training

The NVSL Bioinformatics Workshop will feature training on command-line bioinformatic tools, processes, and resources routinely used at NVSL for diagnostic testing.