USC Division of Biostatistics

USC Division of Biostatistics's repositories

slurmR

slurmR: A Lightweight Wrapper for Slurm

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partition

A fast and flexible framework for data reduction in R

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software-dev

Coding Standards for the USC Biostats group

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rbootcamp

R boot camp: Scientific Computing

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PM566

USC's Introduction to Health Data Science

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PM520

PM520 Advanced Statistical Computing

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xrnet

R Package for Hierarchical Regularized Regression to Incorporate External Data

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GxEScanR

R version of GxEScan

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aphylo

Statistical inference of genetic functions in phylogenetic trees

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AnnoQR

R client wrap for AnnoQ API

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cit

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LAsBEST

Repository of USC's LA's BEST program. https://lasbest.usc.edu/

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ACDC

Association of covariance to detect differential co-expression

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BinaryDosage

Converts VCF files to a binary format

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PM566-whoami

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.github

Will contain details for our organization's landing page

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annoq-api

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annoq-api-v2

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annoq-data-builder

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annoq-database

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annoq-py

Python package for annoq-api-v2

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annoq-site

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Annoq_Overrepr_Workflow

A workflow to query Annoq and run the overrepresentation

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geese-simulations

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MethCon5

Identify and rank CpG DNA methylation conservation along the human genome

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MRIreduce

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peregrine

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PM516

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PM566-bots

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SNPs-to-Genes_SnpEff-VEP-ANNOVAR

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