UMichPFRG / 3DSlicer_open_mrb_extract_markup_info

Example functions to retrieve markup information from 3D Slicer .mrb files

3DSlicer_open_mrb_extract_markup_info

Example functions to retrieve markup information from 3D Slicer .mrb files

Functions available:

1. open_file_get_points_fcsv

   • extracts point coordinates if file in .mrb is .fcsv

2. open_file_get_points

   • extracts point coordinates from .mrk.json

3. open_file_get_length

   • extracts length from .mrk.json

4. open_file_get_area

   • extracts area from .mrk.json

5. open_file_get_angle

   • extracts angle from .mrk.json

Example code

open_mrb_get_markup_info_pseudocode.py

Has example with for loop that opens all .mrb files in folder and saves markup information into dictionary and dataframe