UCSC Nanopore and CGL

UCSC Nanopore and CGL's repositories

MarginPolish: Graph based assembly polishing

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HMM-HDP models for MinION signal alignments

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Tools used to analyze data from nanopore-based experiments.

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UCSC Nanopore

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Collaboration repository with Nanopore Group

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Nanopore toolkit for basic processing of nanopore reads

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Nanopore Run Length Encoding: analysis pipeline

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Small general purpose library for C and Python with focus on bioinformatics.

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TOIL marginPhase pipeline

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