Vojtech Tlaskal's repositories
iNaturalist_app
iNaturalist data download and visualization
NMDS_shiny
App for fast NMDS plots
Deadwood-microbiome
Data pipelines for analysis of deadwood microbiome
Deadwood-Sodalis
Scripts for processing of deadwood Sodalis genome
long-read-catalog
catalog for long-read sequencing tools
TMS_probes_CO2_flux
TMS and eosFD soil probes - history Prague & Zofin
TMS_visualization
Fast ggplots for data from TMS dataloggers.
BigBookofR
The biggest collection of R books (and maybe later some other resources too)
Blog
This repository contains codes for all of my blog posts since March 11 2015.
Soil_flux_app
Shiny app for soil flux visualization
co-occurrence
R scripts for performing co-occurrence analyses
Deadwood-bacterial-isolates
Processing script for bacterial genome assembly and annotation
iNaturalist-Czech-Republic
iNat data for Czech Republic
INF-BIO9120_fall2013_de_novo_assembly
Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013
r-programming
Set of examples, exercises and quizzes for DAT209x - Programming in R for Data Science course in edx
sarcophilus_harrisii_genome
ipynb project
shields
Concise, consistent, and legible badges in SVG and raster format
srdb_flux_calculation
Almost one-liner averaging data from Global soil respiration database (https://github.com/bpbond/srdb)
Unicycler-genome-assembly
script which performs genome assembly of short reads