Tim Maier's repositories
BiochemicalAlgorithms.jl
The Biochemical Algorithms Library in Julia
rustims_tm
A lightning fast hackable API for timsTOF data written in RUST
pystoms
Analysis of precursor MS features using bayesian statistics.
pymc
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Aesara
arviz
Exploratory analysis of Bayesian models with Python
ionmob
An open-source prediction framework for peptide ion collision cross section (CCS) values with python.
proteolizard-data
a collection of tools and wrapper classes for timsTOF data access and processing
proteolizard-algorithm
prototype machine-learning solutions for high-throughput MS with ease
alphatims
An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.
proteolizard-vis
a collection of python classes and widgets for display of all aquisitions generated by timsTOF
aeppl
Tools for an Aesara-based PPL.
pymc-examples
Examples of PyMC models, including a library of Jupyter notebooks.
aesara
Aesara is a Python library that allows one to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.
dvc
🦉Data Version Control | Git for Data & Models | ML Experiments Management
mcmc_runtime_comparison
Compares Stan, PyMC, and PyMC + JAX numpyro sampler on a model for tennis
machine-learning-algorithm-implemention
Implement algorithms with basic functions
PyTestforDataScience_PyDataLA
Pytest for Data Science Beginners