TimNicholsonShaw

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Tim Nicholson-Shaw's repositories

tailer

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timnicholsonshaw.github.io

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affirmation

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AnOThER-Seq

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BedExpander

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BG_GS_Nanopore_Analysis

Tools for looking at nanopore data from my Beta-Globin Gene-specific sequencing

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BIMM143_examples

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NorthernAnalysis

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RNA-Seq-Analysis

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tailer-analysis

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BIMM143_SPR22

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eCLIP_Analysis

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fastq_decomposer

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jla-demultiplexer

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learn_git

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piler

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rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

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scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

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tailfindr

An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.

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timutils

Reusable analysis code

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