Teichlab / bbknn

Batch balanced KNN

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Issues importing bbknn after successful install

ngolan1 opened this issue · comments

Hello,

I was able to successfully install bbknn; however, when I went to run it in a notebook, I got the following error:

AssertionError: Failed in nopython mode pipeline (step: native lowering)
Storing i64 to ptr of i32 ('dim'). FE type int32

I realize that this error is related to numba (currently running 0.54.1) . I tried downgrading it to 0.52.0; however, I got a few compatibility issues with bbknn. Do you have any suggestions?

Thank you!