Mizuki Takemoto's repositories
openmm
OpenMM is a toolkit for molecular simulation using high performance GPU code.
nndownload
Download and process links from Niconico (nicovideo.jp)
mdtraj
An open library for the analysis of molecular dynamics trajectories
alphafold
Open source code for AlphaFold.
pymbar
Python implementation of the multistate Bennett acceptance ratio (MBAR)
denoising-diffusion-pytorch
Implementation of Denoising Diffusion Probabilistic Model in Pytorch
consensus_creator
Make consensus sequence from FASTA file
Looking-to-Listen-at-the-Cocktail-Party
Executable code based on Google articles
VSCoding-Sequence
VSCode Extension for interactively visualising protein structure data in the editor
pyswarms
A research toolkit for particle swarm optimization in Python
PyEMMA
🚂 Python API for Emma's Markov Model Algorithms 🚂
niconico_dl
ニコニコ動画の動画のダウンロードをするためのPython用モジュール。
openmmtools
A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.
chainercv
ChainerCV: a Library for Deep Learning in Computer Vision
chainer-chemistry
Chainer Chemistry: A Library for Deep Learning in Biology and Chemistry
chainer
A flexible framework of neural networks for deep learning
cuemol2
CueMol: Molecular Visualization Framework
niconico
wrapper of Mechanize, optimized for nicovideo.
gitignore
A collection of useful .gitignore templates
FlexAID
Flexible Artificial Intelligence Docking
FSECplotter2
New version of (Shimazu/Hitachi) FSCEplotter written in Python3 and PyQt5
FSECplotter
automated plotter for FSEC users
calendar_updater
Get schedule, update calendar