Taiyou / SocialDefeatStressProtocol

This repository describes social defeat stress protocol and the social interaction test.

SocialDefeatStressProtocol

This repository describes social defeat stress protocol and the social interaction test at OIST, specially A366 in Lab 1 level A.

I summarized the protocol in benchling. Repeated social defeat stress protocol

MATLAB codes:

makeList.m
getCoordinates.m
SI_Hgraph.m

SI_Hgraph generates heatmaps of object and social interaction.

Example1

>> datapath = '/your_directory/SampleData/control';
>> SI_Hgraph(datapath);

A heatmap of object interaction

A heatmap of social interaction

Example2

>> TestSDandCont

A boxplot contrasting social interaction score in the repeatedly socially defeated model and control groups.

Furthermore, please check codes by yourself.