Starlitnightly

omicverse

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

single_cell_tutorial

单细胞分析的中文pipeline

bioinformatic_tutorial

生物信息学相关的教程

scltnn

A composite regression neural network for latent timing prediction of single-cell RNA-seq data

omicverse-reproducibility

Reproducibility of results/figures from omicverse paper

AlphaSeer

你的私人赛尔对战Ai

Epiverse

Epiverse is the fundamental package for single cell Assay for Transposase-Accessible Chromatin using sequencing (scATAC-seq) with Python.

112lab

112lab.github.io

112 lab at USTB

Analysis_JHQG_COVID

Analysis_microbiome_msc

Reproducibility of results/figures from microbiome paper

bio-mate

bio_lab

bioconda-recipes

Conda recipes for the bioconda channel.

bulk2space

a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles

cellfategenie

cv

cytotrace2

CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

ecosystem-packages

Registry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)

gatsby-starter-delog

A blog for designers and developer, built with Gatsby and Netlfiy CMS. Live demo https://delog-w3layouts.netlify.com/

GLUE

Graph-linked unified embedding for single-cell multi-omics data integration

lab-website-template

An easy-to-use, flexible website template for labs

linux_lihualou

Liver_clock

C57/BL6 Age calculation clock model

media-bias

omicverse-feedstock

A conda-smithy repository for omicverse.

SL_analysis

SLAT

Spatial-Linked Alignment Tool

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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