Simon Lee's repositories
antibiotics-fm-benchmark
[NeurIPs High School 2024] A benchmarking study on medical foundation models for antibiotic susceptibility prediction.
Algorithms-Almanac
Continuously Updating Ken Lange's "Algorithms from The Book"
Find_My_Bread
[Game 2021] My first indie platformer game. The concept is a french man looking for his bread.
Patient-Like-Me
[Optum Labs Grant 2024] KNN-Classifier
ABP_Imputation-With-EHR
[BIG Summer 2022] ABP Imputation with EHR medication data is the second version of the ABP Imputer model.
bulk-deconvolution
Cellular Deconvolution Benchmarking Package. Includes plotting features, easy to load training and deconvolution functions, and a lot of documentation
embeddings_eval
How Should Embeddings be Evaluated
Literature-search
A list of papers I am reading.
neurips-mia-2021
https://openproblems.bio/#about
SerialMedBERT
We Continue Pre-training on sciBERT
UCLA-Grad-Courses
Graduate Courses taken at UCLA
Anime-recommendations
A mini project done on recommendation systems. We utilized the BERT transformer model and cosine similarity to make our recommendations.
Biobank-BIND-LoRA
Fine-tuning "ImageBind One Embedding Space to Bind Them All" with LoRA
Celltype_Classification
BIO 322 Cell Prediction project. By Simon Lee and Léa Goffinet
deep-learning
A repository dedicated to deep learning. Working with PyTorch on a Mac, so no GPU access
EPFL
A repository of different projects/assignments done at EPFL
gerrymandering-polarisation-study
An analysis conducted on Gerrymandering & Polarisation
Lost-Self-Game
Lost: an indie RPG game by Simon Lee
Simonlee711
Config files for my GitHub profile.
Youtube-The-Mirror-Society
[EPFL 2022] Youtube, mirror of Society Data Analysis Project
LLM-on-Tabular-Data-Prediction-Table-Understanding-Data-Generation
Repository for collecting and categorizing papers outlined in our survey paper: "Large Language Models on Tabular Data -- A Survey".
Neural-Ordinary-Differential-Equations
Repository to study Neural ODE's
papers-tex
My Research Papers as tex files
presentations
A repository to store presentations
Simonlee711.github.io
Simon's Personal Website
starwars
A simulation of the "Star Wars" cellular automata rule (345/2/4)