Shubhranshu2411's repositories
ansible-locales
Ansible role to set up locales in Debian-like systems
ansible-role-gitlab
Ansible Role - GitLab
ansible-roles
Collection of OME Ansible roles
ansible-roles-1
Manala ansible roles
ansible_nextcloud
Ansible role for installing a nextcloud server.
ashlar
ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
basic-illumination
ImageJ BaSiC shading correction for use with Ashlar
biop-bash-scripts
Bash scripts to simplify your life (let's hope so!)
BIOP-OMERO-scripts
Series of script to make use of OMERO
BIOP-qupath-scripts
This repository contains Scripts we found useful when using QuPath
ejbca-ce
EJBCA® – Open-source public key infrastructure (PKI) and certificate authority (CA) software.
EmbedAI
An app to interact privately with your documents using the power of GPT, 100% privately, no data leaks
i-librarian-free
I, Librarian - open-source version of a PDF managing SaaS.
jax-omero-utils
A module and scripts for working with OMERO
myosothes
An automated Myofibers Segmentation wOrkflow Tuned for HE Staining
NoCodeSeg
🔬 Code-free deep segmentation for computational pathology
ObiWan-Microbi
Omero based integrated Workflow for annotating Microbes in the Cloud
ome-tiff-pyramid-tools
Python tools for creating and manipulating OME-TIFF multi-resolution pyramid images.
omero-onenode
Example of deploying an OMERO.server on a single-node
omero-scripts
Core OMERO Scripts
Omero-training-scripts
A set of scripts to access, analyse image and metadata from OMERO
privateGPT
Interact privately with your documents using the power of GPT, 100% privately, no data leaks
prod-playbooks
Playbooks used by the OME team for deploying production services including OMERO
proxmox-scripts
Nginx proxy manager
stitching
A Python package for fast and robust Image Stitching
Universal-StarDist-for-QuPath
Transfer trained StarDist models across imaging modalities
W-IDM_OmeroImporter
This repository contains sofware that was created for the automatic image data management of image data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.
ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy